Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nup43P59235 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nup43P59235 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nup43P59235 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nup43P59235 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.3□□□□□ -0.44
Nup43P59235 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup43P59235 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nup43P59235 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.3□□□□□ -0.44
Nup43P59235 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Gm29127-201ENSMUST00000188304 517 ntBASIC12.3□□□□□ -0.44
Nup43P59235 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup43P59235 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup43P59235 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Nup43P59235 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup43P59235 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup43P59235 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup43P59235 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup43P59235 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup43P59235 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup43P59235 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup43P59235 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Gm13829-201ENSMUST00000119600 138 ntBASIC12.29□□□□□ -0.44
Nup43P59235 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.29□□□□□ -0.44
Nup43P59235 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.29□□□□□ -0.44
Nup43P59235 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.29□□□□□ -0.44
Nup43P59235 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup43P59235 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.29□□□□□ -0.44
Nup43P59235 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nup43P59235 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nup43P59235 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup43P59235 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nup43P59235 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms