Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SmoP56726 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.08□□□□□ -0.32
SmoP56726 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.08□□□□□ -0.32
SmoP56726 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SmoP56726 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.08□□□□□ -0.32
SmoP56726 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.08□□□□□ -0.32
SmoP56726 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SmoP56726 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.08□□□□□ -0.32
SmoP56726 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Gm6013-201ENSMUST00000212264 699 ntBASIC13.08□□□□□ -0.32
SmoP56726 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.08□□□□□ -0.32
SmoP56726 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.08□□□□□ -0.32
SmoP56726 Gm7399-201ENSMUST00000032395 858 ntBASIC13.08□□□□□ -0.32
SmoP56726 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SmoP56726 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SmoP56726 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.08□□□□□ -0.32
SmoP56726 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SmoP56726 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.07□□□□□ -0.32
SmoP56726 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.07□□□□□ -0.32
SmoP56726 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.07□□□□□ -0.32
SmoP56726 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Gm12291-201ENSMUST00000121627 311 ntBASIC13.07□□□□□ -0.32
SmoP56726 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Gm18584-201ENSMUST00000203098 964 ntBASIC13.07□□□□□ -0.32
SmoP56726 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.07□□□□□ -0.32
SmoP56726 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.07□□□□□ -0.32
SmoP56726 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SmoP56726 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.07□□□□□ -0.32
SmoP56726 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SmoP56726 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.07□□□□□ -0.32
SmoP56726 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SmoP56726 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.07□□□□□ -0.32
SmoP56726 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.06□□□□□ -0.32
SmoP56726 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SmoP56726 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.06□□□□□ -0.32
SmoP56726 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.06□□□□□ -0.32
SmoP56726 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.06□□□□□ -0.32
SmoP56726 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.06□□□□□ -0.32
SmoP56726 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.06□□□□□ -0.32
SmoP56726 Gm8099-201ENSMUST00000200510 742 ntBASIC13.06□□□□□ -0.32
SmoP56726 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Gm45331-201ENSMUST00000209868 554 ntBASIC13.06□□□□□ -0.32
SmoP56726 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.06□□□□□ -0.32
SmoP56726 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SmoP56726 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.06□□□□□ -0.32
SmoP56726 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SmoP56726 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SmoP56726 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SmoP56726 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SmoP56726 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.06□□□□□ -0.32
SmoP56726 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.06□□□□□ -0.32
SmoP56726 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.06□□□□□ -0.32
SmoP56726 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SmoP56726 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SmoP56726 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SmoP56726 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SmoP56726 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms