Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.09□□□□□ -0.47
Thbs1P35441 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.09□□□□□ -0.47
Thbs1P35441 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.09□□□□□ -0.47
Thbs1P35441 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thbs1P35441 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.47
Thbs1P35441 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Thbs1P35441 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Thbs1P35441 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Thbs1P35441 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Thbs1P35441 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Thbs1P35441 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.08□□□□□ -0.48
Thbs1P35441 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.08□□□□□ -0.48
Thbs1P35441 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Thbs1P35441 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Thbs1P35441 Gm12138-201ENSMUST00000122180 951 ntBASIC12.08□□□□□ -0.48
Thbs1P35441 Gm2495-201ENSMUST00000191160 466 ntBASIC12.08□□□□□ -0.48
Thbs1P35441 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.08□□□□□ -0.48
Thbs1P35441 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.08□□□□□ -0.48
Thbs1P35441 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.08□□□□□ -0.48
Thbs1P35441 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Thbs1P35441 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Thbs1P35441 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Thbs1P35441 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Thbs1P35441 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Thbs1P35441 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.07□□□□□ -0.48
Thbs1P35441 Gm14127-201ENSMUST00000117906 678 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.07□□□□□ -0.48
Thbs1P35441 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Thbs1P35441 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Thbs1P35441 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.07□□□□□ -0.48
Thbs1P35441 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Gm45384-201ENSMUST00000210451 277 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Gm9908-201ENSMUST00000211534 448 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.07□□□□□ -0.48
Thbs1P35441 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.07□□□□□ -0.48
Thbs1P35441 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Thbs1P35441 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms