Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Rprl1-202ENSMUST00000198476 238 ntBASIC14.47□□□□□ -0.09
Gjb1P28230 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.47□□□□□ -0.09
Gjb1P28230 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.47□□□□□ -0.09
Gjb1P28230 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.47□□□□□ -0.09
Gjb1P28230 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Gjb1P28230 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Gjb1P28230 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Gjb1P28230 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gjb1P28230 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Gjb1P28230 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.46□□□□□ -0.09
Gjb1P28230 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Gjb1P28230 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.46□□□□□ -0.09
Gjb1P28230 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.46□□□□□ -0.09
Gjb1P28230 Gm13888-201ENSMUST00000119148 422 ntBASIC14.46□□□□□ -0.09
Gjb1P28230 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gjb1P28230 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Gjb1P28230 Gm9540-201ENSMUST00000188230 478 ntBASIC14.46□□□□□ -0.09
Gjb1P28230 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Gjb1P28230 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.46□□□□□ -0.09
Gjb1P28230 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gjb1P28230 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gjb1P28230 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Gjb1P28230 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gjb1P28230 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gjb1P28230 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.46□□□□□ -0.1
Gjb1P28230 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gjb1P28230 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gjb1P28230 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gjb1P28230 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gjb1P28230 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.46□□□□□ -0.1
Gjb1P28230 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Acot6-202ENSMUST00000222921 3622 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Gm13492-201ENSMUST00000119772 665 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 Gm15432-201ENSMUST00000121106 195 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.45□□□□□ -0.1
Gjb1P28230 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.45□□□□□ -0.1
Gjb1P28230 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.45□□□□□ -0.1
Gjb1P28230 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 Gzmn-202ENSMUST00000225535 989 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gjb1P28230 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Gm10312-201ENSMUST00000078515 489 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Gm22058-201ENSMUST00000083393 310 ntBASIC14.45□□□□□ -0.1
Gjb1P28230 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Gjb1P28230 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gjb1P28230 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gjb1P28230 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms