Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm7287-201ENSMUST00000205267 602 ntBASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.05□□□□□ -0.48
Cd40lgP27548 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Cd40lgP27548 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cd40lgP27548 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.05□□□□□ -0.48
Cd40lgP27548 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cd40lgP27548 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.05□□□□□ -0.48
Cd40lgP27548 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.04□□□□□ -0.48
Cd40lgP27548 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm6152-201ENSMUST00000151704 340 ntBASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm27839-201ENSMUST00000184242 106 ntBASIC12.04□□□□□ -0.48
Cd40lgP27548 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm18473-201ENSMUST00000220543 868 ntBASIC12.04□□□□□ -0.48
Cd40lgP27548 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40lgP27548 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cd40lgP27548 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Paupar-201ENSMUST00000194826 3482 ntBASIC12.03□□□□□ -0.48
Cd40lgP27548 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Gm14127-201ENSMUST00000117906 678 ntBASIC12.03□□□□□ -0.48
Cd40lgP27548 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Gm25927-201ENSMUST00000175058 117 ntBASIC12.03□□□□□ -0.48
Cd40lgP27548 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Gm2495-201ENSMUST00000191160 466 ntBASIC12.03□□□□□ -0.48
Cd40lgP27548 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms