Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.23□□□□□ -0.45
Clk1P22518 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Clk1P22518 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clk1P22518 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Clk1P22518 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.22□□□□□ -0.45
Clk1P22518 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Clk1P22518 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
Clk1P22518 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Gm12341-201ENSMUST00000119724 503 ntBASIC12.22□□□□□ -0.45
Clk1P22518 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.22□□□□□ -0.45
Clk1P22518 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.22□□□□□ -0.45
Clk1P22518 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.22□□□□□ -0.45
Clk1P22518 Gm18624-201ENSMUST00000220966 658 ntBASIC12.22□□□□□ -0.45
Clk1P22518 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.22□□□□□ -0.45
Clk1P22518 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.22□□□□□ -0.45
Clk1P22518 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clk1P22518 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clk1P22518 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.21□□□□□ -0.45
Clk1P22518 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Clk1P22518 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Clk1P22518 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Clk1P22518 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm12403-201ENSMUST00000121384 959 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm15376-201ENSMUST00000122258 783 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.21□□□□□ -0.45
Clk1P22518 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Mir6392-201ENSMUST00000184924 108 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Gm42550-201ENSMUST00000201553 960 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.21□□□□□ -0.45
Clk1P22518 Gm45668-201ENSMUST00000211271 493 ntBASIC12.21□□□□□ -0.45
Clk1P22518 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.21□□□□□ -0.45
Clk1P22518 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.21□□□□□ -0.45
Clk1P22518 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.21□□□□□ -0.45
Clk1P22518 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Clk1P22518 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clk1P22518 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Clk1P22518 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms