Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc6P10629 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Hoxc6P10629 Gm25700-201ENSMUST00000177693 110 ntBASIC14.39□□□□□ -0.11
Hoxc6P10629 Gm44262-201ENSMUST00000204969 372 ntBASIC14.39□□□□□ -0.11
Hoxc6P10629 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.39□□□□□ -0.11
Hoxc6P10629 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Hoxc6P10629 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc6P10629 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc6P10629 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm22334-201ENSMUST00000158070 133 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm28450-201ENSMUST00000187349 638 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxc6P10629 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm45925-201ENSMUST00000218882 744 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc6P10629 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.38□□□□□ -0.11
Hoxc6P10629 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc6P10629 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.37□□□□□ -0.11
Hoxc6P10629 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.37□□□□□ -0.11
Hoxc6P10629 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Hoxc6P10629 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc6P10629 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc6P10629 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc6P10629 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc6P10629 Gm5523-201ENSMUST00000180415 997 ntBASIC14.37□□□□□ -0.11
Hoxc6P10629 Gm43378-201ENSMUST00000199336 582 ntBASIC14.37□□□□□ -0.11
Hoxc6P10629 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxc6P10629 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Gm8385-201ENSMUST00000058999 643 ntBASIC14.37□□□□□ -0.11
Hoxc6P10629 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hoxc6P10629 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc6P10629 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms