Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
CfdP03953 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
CfdP03953 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CfdP03953 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CfdP03953 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.87□□□□□ -0.67
CfdP03953 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.87□□□□□ -0.67
CfdP03953 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.87□□□□□ -0.67
CfdP03953 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
CfdP03953 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Gm27772-201ENSMUST00000184900 187 ntBASIC10.87□□□□□ -0.67
CfdP03953 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Gm43125-201ENSMUST00000201724 730 ntBASIC10.87□□□□□ -0.67
CfdP03953 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.87□□□□□ -0.67
CfdP03953 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
CfdP03953 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
CfdP03953 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.87□□□□□ -0.67
CfdP03953 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CfdP03953 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CfdP03953 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.86□□□□□ -0.67
CfdP03953 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.86□□□□□ -0.67
CfdP03953 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.86□□□□□ -0.67
CfdP03953 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.86□□□□□ -0.67
CfdP03953 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.86□□□□□ -0.67
CfdP03953 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.86□□□□□ -0.67
CfdP03953 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.86□□□□□ -0.67
CfdP03953 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
CfdP03953 Gm18905-201ENSMUST00000205454 928 ntBASIC10.86□□□□□ -0.67
CfdP03953 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CfdP03953 Gm46209-201ENSMUST00000217912 553 ntBASIC10.86□□□□□ -0.67
CfdP03953 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.86□□□□□ -0.67
CfdP03953 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.86□□□□□ -0.67
CfdP03953 Gm24447-201ENSMUST00000083977 338 ntBASIC10.86□□□□□ -0.67
CfdP03953 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.86□□□□□ -0.67
CfdP03953 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CfdP03953 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CfdP03953 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms