Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Ubr1O70481 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Ubr1O70481 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ubr1O70481 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC16.56■□□□□ 0.24
Ubr1O70481 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC16.56■□□□□ 0.24
Ubr1O70481 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ubr1O70481 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.56■□□□□ 0.24
Ubr1O70481 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Ubr1O70481 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Ubr1O70481 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Gm24514-201ENSMUST00000174961 285 ntBASIC16.56■□□□□ 0.24
Ubr1O70481 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Ubr1O70481 AY036118-201ENSMUST00000200021 923 ntBASIC16.56■□□□□ 0.24
Ubr1O70481 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.56■□□□□ 0.24
Ubr1O70481 Gm6781-201ENSMUST00000038304 1242 ntBASIC16.56■□□□□ 0.24
Ubr1O70481 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ubr1O70481 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubr1O70481 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.55■□□□□ 0.24
Ubr1O70481 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Ubr1O70481 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ubr1O70481 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Ubr1O70481 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ubr1O70481 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.55■□□□□ 0.24
Ubr1O70481 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Olfr1347-205ENSMUST00000220413 964 ntBASIC16.55■□□□□ 0.24
Ubr1O70481 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ubr1O70481 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.55■□□□□ 0.24
Ubr1O70481 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ubr1O70481 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubr1O70481 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubr1O70481 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubr1O70481 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubr1O70481 Gm6506-201ENSMUST00000119775 1136 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm27627-201ENSMUST00000183644 150 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm29615-201ENSMUST00000185371 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm28224-201ENSMUST00000186078 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm29001-201ENSMUST00000186177 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm28292-201ENSMUST00000186593 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm28101-201ENSMUST00000187608 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm29076-201ENSMUST00000187689 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm28302-201ENSMUST00000187931 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm28646-201ENSMUST00000188220 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm28205-201ENSMUST00000189177 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm29032-201ENSMUST00000189797 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm28695-201ENSMUST00000190300 697 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Gm37448-201ENSMUST00000192795 697 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms