Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Ebf3O08791 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ebf3O08791 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ebf3O08791 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ebf3O08791 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ebf3O08791 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.55□□□□□ -0.24
Ebf3O08791 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Gm6447-201ENSMUST00000118905 835 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 Gm2231-201ENSMUST00000125661 612 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.55□□□□□ -0.24
Ebf3O08791 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Gm38341-201ENSMUST00000195357 515 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 Gm18056-201ENSMUST00000207670 568 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 Gm18061-201ENSMUST00000208350 562 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 Gm18063-201ENSMUST00000208529 568 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 Gm18052-201ENSMUST00000208750 559 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 Gm45865-201ENSMUST00000211815 945 ntBASIC13.55□□□□□ -0.24
Ebf3O08791 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
Ebf3O08791 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ebf3O08791 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ebf3O08791 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf3O08791 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ebf3O08791 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ebf3O08791 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.54□□□□□ -0.24
Ebf3O08791 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.54□□□□□ -0.24
Ebf3O08791 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.54□□□□□ -0.24
Ebf3O08791 Gm4857-201ENSMUST00000192718 785 ntBASIC13.54□□□□□ -0.24
Ebf3O08791 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.54□□□□□ -0.24
Ebf3O08791 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ebf3O08791 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.54□□□□□ -0.24
Ebf3O08791 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.54□□□□□ -0.24
Ebf3O08791 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ebf3O08791 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.54□□□□□ -0.24
Ebf3O08791 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf3O08791 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Ebf3O08791 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.53□□□□□ -0.24
Ebf3O08791 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf3O08791 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf3O08791 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms