Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AlyrefO08583 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AlyrefO08583 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.23□□□□□ -0.29
AlyrefO08583 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.23□□□□□ -0.29
AlyrefO08583 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
AlyrefO08583 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
AlyrefO08583 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.23□□□□□ -0.29
AlyrefO08583 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Gm43610-201ENSMUST00000199117 365 ntBASIC13.23□□□□□ -0.29
AlyrefO08583 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Gm5781-201ENSMUST00000219792 443 ntBASIC13.23□□□□□ -0.29
AlyrefO08583 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.23□□□□□ -0.29
AlyrefO08583 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.23□□□□□ -0.29
AlyrefO08583 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
AlyrefO08583 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Ntng1-201ENSMUST00000051253 327 ntBASIC13.23□□□□□ -0.29
AlyrefO08583 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
AlyrefO08583 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
AlyrefO08583 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.23□□□□□ -0.29
AlyrefO08583 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AlyrefO08583 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
AlyrefO08583 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.22□□□□□ -0.29
AlyrefO08583 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.22□□□□□ -0.29
AlyrefO08583 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.22□□□□□ -0.29
AlyrefO08583 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
AlyrefO08583 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
AlyrefO08583 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
AlyrefO08583 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.22□□□□□ -0.29
AlyrefO08583 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.22□□□□□ -0.29
AlyrefO08583 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.22□□□□□ -0.29
AlyrefO08583 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.22□□□□□ -0.29
AlyrefO08583 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
AlyrefO08583 Gm9358-201ENSMUST00000183067 927 ntBASIC13.22□□□□□ -0.29
AlyrefO08583 Gm27552-201ENSMUST00000183351 62 ntBASIC13.22□□□□□ -0.29
AlyrefO08583 Gm27844-201ENSMUST00000183613 62 ntBASIC13.22□□□□□ -0.29
AlyrefO08583 Gm5621-201ENSMUST00000187303 640 ntBASIC13.22□□□□□ -0.29
AlyrefO08583 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.22□□□□□ -0.29
AlyrefO08583 Gm43778-201ENSMUST00000199438 199 ntBASIC13.22□□□□□ -0.29
AlyrefO08583 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.22□□□□□ -0.29
AlyrefO08583 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.22□□□□□ -0.29
AlyrefO08583 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
AlyrefO08583 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
AlyrefO08583 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
AlyrefO08583 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
AlyrefO08583 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
AlyrefO08583 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms