Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm8805-201ENSMUST00000117848 313 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm14723-201ENSMUST00000118686 215 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm27501-201ENSMUST00000183599 107 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Mir8109-201ENSMUST00000184375 117 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm42627-201ENSMUST00000197347 224 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm43133-201ENSMUST00000197472 463 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm45930-201ENSMUST00000221330 292 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh17E9PXF0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Pcdh17E9PXF0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh17E9PXF0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh17E9PXF0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Pcdh17E9PXF0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh17E9PXF0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh17E9PXF0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Pcdh17E9PXF0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Gm9257-201ENSMUST00000221254 232 ntBASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh17E9PXF0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh17E9PXF0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms