Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.05□□□□□ -0.64
BC035044E0CXF8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Gm24694-201ENSMUST00000180054 110 ntBASIC11.05□□□□□ -0.64
BC035044E0CXF8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Gm27663-201ENSMUST00000184839 110 ntBASIC11.05□□□□□ -0.64
BC035044E0CXF8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.05□□□□□ -0.64
BC035044E0CXF8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
BC035044E0CXF8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.04□□□□□ -0.64
BC035044E0CXF8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Mir686-201ENSMUST00000102174 109 ntBASIC11.04□□□□□ -0.64
BC035044E0CXF8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.04□□□□□ -0.64
BC035044E0CXF8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.04□□□□□ -0.64
BC035044E0CXF8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.04□□□□□ -0.64
BC035044E0CXF8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BC035044E0CXF8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.03□□□□□ -0.64
BC035044E0CXF8 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.03□□□□□ -0.64
BC035044E0CXF8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Mir6956-201ENSMUST00000183598 62 ntBASIC11.03□□□□□ -0.64
BC035044E0CXF8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.03□□□□□ -0.64
BC035044E0CXF8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms