Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm42769-201ENSMUST00000198576 1659 ntBASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm4797-201ENSMUST00000219075 1283 ntBASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Olfr1347-205ENSMUST00000220413 964 ntBASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 AC132901.1-201ENSMUST00000224345 508 ntBASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Gm8798-201ENSMUST00000211877 1661 ntBASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Gm15881-201ENSMUST00000148792 942 ntBASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hfm1D3Z4R1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Gm25881-201ENSMUST00000157783 103 ntBASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Gm27530-201ENSMUST00000184096 98 ntBASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC17.95■□□□□ 0.46
Hfm1D3Z4R1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Gm23596-201ENSMUST00000104304 132 ntBASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Gm19287-201ENSMUST00000203190 358 ntBASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hfm1D3Z4R1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms