Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.82□□□□□ -0.52
Gm3543D3Z235 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Gm11425-201ENSMUST00000119608 498 ntBASIC11.82□□□□□ -0.52
Gm3543D3Z235 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Mir1982-201ENSMUST00000157368 74 ntBASIC11.82□□□□□ -0.52
Gm3543D3Z235 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Gm9396-201ENSMUST00000076703 567 ntBASIC11.82□□□□□ -0.52
Gm3543D3Z235 Gm10012-201ENSMUST00000078252 192 ntBASIC11.82□□□□□ -0.52
Gm3543D3Z235 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.82□□□□□ -0.52
Gm3543D3Z235 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3543D3Z235 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm7561-201ENSMUST00000211203 886 ntBASIC11.81□□□□□ -0.52
Gm3543D3Z235 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm16372-201ENSMUST00000073088 450 ntBASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm6091-201ENSMUST00000098307 165 ntBASIC11.81□□□□□ -0.52
Gm3543D3Z235 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.81□□□□□ -0.52
Gm3543D3Z235 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3543D3Z235 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms