Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.26□□□□□ -0.13
Trim30cD3YVI9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.26□□□□□ -0.13
Trim30cD3YVI9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Gm9908-201ENSMUST00000211534 448 ntBASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim30cD3YVI9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Gm43094-201ENSMUST00000196549 921 ntBASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Gm19078-201ENSMUST00000206311 727 ntBASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Gm7653-201ENSMUST00000214567 508 ntBASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim30cD3YVI9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Gm11524-201ENSMUST00000119349 807 ntBASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Gm14716-201ENSMUST00000120138 718 ntBASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Gm5745-201ENSMUST00000183748 313 ntBASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Gm43930-201ENSMUST00000203868 845 ntBASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Gm18307-201ENSMUST00000206864 949 ntBASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim30cD3YVI9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 247.5 ms