Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Cog3-203ENSMUST00000227473 4197 ntBASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav8-1A0A075B641 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Gm27920-201ENSMUST00000183953 96 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms