Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm6153-201ENSMUST00000172004 1058 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm24420-201ENSMUST00000176676 59 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm5641-202ENSMUST00000198699 1080 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav7n-4A0A075B620 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm21470-201ENSMUST00000187680 696 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm28659-201ENSMUST00000188013 759 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm33320-201ENSMUST00000192232 530 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm44492-201ENSMUST00000197012 141 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm20553-201ENSMUST00000204205 844 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm18195-201ENSMUST00000207604 706 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav7n-4A0A075B620 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms