Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.77□□□□□ -0.36
Atp6ap1Q9R1Q9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atp6ap1Q9R1Q9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm10012-201ENSMUST00000078252 192 ntBASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atp6ap1Q9R1Q9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.75□□□□□ -0.37
Atp6ap1Q9R1Q9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms