Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk1aQ9D132 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.37□□□□□ -0.43
Upk1aQ9D132 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.37□□□□□ -0.43
Upk1aQ9D132 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm6447-201ENSMUST00000118905 835 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.36□□□□□ -0.43
Upk1aQ9D132 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk1aQ9D132 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm17795-201ENSMUST00000214505 757 ntBASIC12.35□□□□□ -0.43
Upk1aQ9D132 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.35□□□□□ -0.43
Upk1aQ9D132 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.35□□□□□ -0.43
Upk1aQ9D132 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms