Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Use1Q9CQ56 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Use1Q9CQ56 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Use1Q9CQ56 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Use1Q9CQ56 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Use1Q9CQ56 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.35□□□□□ -0.43
Use1Q9CQ56 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Use1Q9CQ56 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.34□□□□□ -0.43
Use1Q9CQ56 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm15376-201ENSMUST00000122258 783 ntBASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm15487-201ENSMUST00000122373 465 ntBASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.34□□□□□ -0.43
Use1Q9CQ56 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm28760-201ENSMUST00000185995 736 ntBASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm29608-201ENSMUST00000190444 463 ntBASIC12.34□□□□□ -0.43
Use1Q9CQ56 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm42550-201ENSMUST00000201553 960 ntBASIC12.34□□□□□ -0.43
Use1Q9CQ56 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Use1Q9CQ56 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Use1Q9CQ56 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Use1Q9CQ56 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Use1Q9CQ56 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Use1Q9CQ56 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Use1Q9CQ56 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.33□□□□□ -0.44
Use1Q9CQ56 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.33□□□□□ -0.44
Use1Q9CQ56 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.33□□□□□ -0.44
Use1Q9CQ56 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.33□□□□□ -0.44
Use1Q9CQ56 Gm29667-201ENSMUST00000190817 490 ntBASIC12.33□□□□□ -0.44
Use1Q9CQ56 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.33□□□□□ -0.44
Use1Q9CQ56 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Use1Q9CQ56 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms