Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.77□□□□□ -0.52
Krt88Q9CPR6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gm28630-201ENSMUST00000187806 498 ntBASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.77□□□□□ -0.53
Krt88Q9CPR6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.77□□□□□ -0.53
Krt88Q9CPR6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Gm10253-201ENSMUST00000194270 940 ntBASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Gm43474-201ENSMUST00000196415 774 ntBASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Krt88Q9CPR6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms