Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gm6152-201ENSMUST00000151704 340 ntBASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gm18473-201ENSMUST00000220543 868 ntBASIC14.87□□□□□ -0.03
Trim11Q99PQ2 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Gm44069-201ENSMUST00000204898 506 ntBASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Gm16372-201ENSMUST00000073088 450 ntBASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim11Q99PQ2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Gm2495-201ENSMUST00000191160 466 ntBASIC14.85□□□□□ -0.03
Trim11Q99PQ2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.85□□□□□ -0.03
Trim11Q99PQ2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms