Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Gm28693-202ENSMUST00000190758 331 ntBASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2ird2Q99NI3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Gm12957-201ENSMUST00000117835 377 ntBASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Gm10268-201ENSMUST00000085340 555 ntBASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2ird2Q99NI3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Gm37424-201ENSMUST00000191727 561 ntBASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Gm6458-201ENSMUST00000211573 635 ntBASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.41□□□□□ -0.26
Gtf2ird2Q99NI3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms