Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Mir874-201ENSMUST00000104769 76 ntBASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Gm15371-201ENSMUST00000117057 784 ntBASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Gm24447-201ENSMUST00000083977 338 ntBASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp1b1Q99LU0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm14928-201ENSMUST00000120198 477 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm12403-201ENSMUST00000121384 959 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm38144-201ENSMUST00000192790 465 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm38223-201ENSMUST00000194484 695 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm6745-201ENSMUST00000199216 526 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp1b1Q99LU0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms