Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.15□□□□□ -0.3
Cdk9Q99J95 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.15□□□□□ -0.3
Cdk9Q99J95 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.15□□□□□ -0.3
Cdk9Q99J95 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.15□□□□□ -0.3
Cdk9Q99J95 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.15□□□□□ -0.3
Cdk9Q99J95 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.15□□□□□ -0.3
Cdk9Q99J95 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk9Q99J95 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk9Q99J95 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.14□□□□□ -0.31
Cdk9Q99J95 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Gm6415-201ENSMUST00000118488 348 ntBASIC13.14□□□□□ -0.31
Cdk9Q99J95 Mir1897-201ENSMUST00000122581 272 ntBASIC13.14□□□□□ -0.31
Cdk9Q99J95 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk9Q99J95 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms