Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhac1Q91Y10 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Gm12859-201ENSMUST00000117834 427 ntBASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhac1Q91Y10 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Paupar-201ENSMUST00000194826 3482 ntBASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Mir874-201ENSMUST00000104769 76 ntBASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Mir7221-201ENSMUST00000184009 72 ntBASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhac1Q91Y10 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms