Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Gm14109-201ENSMUST00000118814 309 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Mir5120-201ENSMUST00000175020 78 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Gm25700-201ENSMUST00000177693 110 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Gm27046-201ENSMUST00000182160 463 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Mir339-201ENSMUST00000083659 96 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.28■□□□□ 0.04
Slc44a4Q91VA1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Gm14130-201ENSMUST00000118417 987 ntBASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Gm16296-201ENSMUST00000159905 325 ntBASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Mir6979-201ENSMUST00000183927 56 ntBASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Gm45224-201ENSMUST00000208203 414 ntBASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a4Q91VA1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc44a4Q91VA1 Acot6-202ENSMUST00000222921 3622 ntBASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Gm12217-201ENSMUST00000118858 696 ntBASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Gm14277-201ENSMUST00000121195 360 ntBASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc44a4Q91VA1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms