Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CroccQ8CJ40 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CroccQ8CJ40 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CroccQ8CJ40 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.46□□□□□ -0.41
CroccQ8CJ40 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Gm5687-201ENSMUST00000118252 640 ntBASIC12.46□□□□□ -0.41
CroccQ8CJ40 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.46□□□□□ -0.41
CroccQ8CJ40 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.46□□□□□ -0.41
CroccQ8CJ40 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.46□□□□□ -0.41
CroccQ8CJ40 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.46□□□□□ -0.42
CroccQ8CJ40 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.46□□□□□ -0.42
CroccQ8CJ40 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm4271-201ENSMUST00000174444 973 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm38671-201ENSMUST00000200573 130 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Mir686-201ENSMUST00000102174 109 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm12390-201ENSMUST00000117897 397 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.45□□□□□ -0.42
CroccQ8CJ40 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CroccQ8CJ40 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CroccQ8CJ40 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CroccQ8CJ40 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CroccQ8CJ40 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms