Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Gm13689-201ENSMUST00000119360 685 ntBASIC11.63□□□□□ -0.55
ShfQ8CG80 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.63□□□□□ -0.55
ShfQ8CG80 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.63□□□□□ -0.55
ShfQ8CG80 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.63□□□□□ -0.55
ShfQ8CG80 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Gm19220-201ENSMUST00000222682 803 ntBASIC11.63□□□□□ -0.55
ShfQ8CG80 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
ShfQ8CG80 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.63□□□□□ -0.55
ShfQ8CG80 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.63□□□□□ -0.55
ShfQ8CG80 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ShfQ8CG80 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.62□□□□□ -0.55
ShfQ8CG80 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Gm5687-201ENSMUST00000118252 640 ntBASIC11.62□□□□□ -0.55
ShfQ8CG80 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.62□□□□□ -0.55
ShfQ8CG80 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.62□□□□□ -0.55
ShfQ8CG80 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ShfQ8CG80 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms