Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.12■□□□□ 0.17
Smc5Q8CG46 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.12■□□□□ 0.17
Smc5Q8CG46 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Matn2-203ENSMUST00000226766 3252 ntBASIC16.12■□□□□ 0.17
Smc5Q8CG46 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Gm27177-202ENSMUST00000183514 2703 ntBASIC16.11■□□□□ 0.17
Smc5Q8CG46 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Gm13813-201ENSMUST00000120998 787 ntBASIC16.11■□□□□ 0.17
Smc5Q8CG46 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.11■□□□□ 0.17
Smc5Q8CG46 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc5Q8CG46 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Smc5Q8CG46 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.1■□□□□ 0.17
Smc5Q8CG46 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.1■□□□□ 0.17
Smc5Q8CG46 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc5Q8CG46 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Gm12341-201ENSMUST00000119724 503 ntBASIC16.09■□□□□ 0.17
Smc5Q8CG46 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Gm44069-201ENSMUST00000204898 506 ntBASIC16.09■□□□□ 0.17
Smc5Q8CG46 Gm6983-201ENSMUST00000214912 628 ntBASIC16.09■□□□□ 0.17
Smc5Q8CG46 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.09■□□□□ 0.17
Smc5Q8CG46 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.09■□□□□ 0.17
Smc5Q8CG46 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms