Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm12403-201ENSMUST00000121384 959 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc87Q8CDL9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Gm28631-201ENSMUST00000190740 334 ntBASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc87Q8CDL9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms