Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gm16215-201ENSMUST00000161990 637 ntBASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gm10576-201ENSMUST00000191927 825 ntBASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gm5279-201ENSMUST00000199575 745 ntBASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf170Q8CBG9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gm12485-201ENSMUST00000119641 291 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gm15321-201ENSMUST00000121290 288 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Paupar-201ENSMUST00000194826 3482 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf170Q8CBG9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms