Protein–RNA interactions for Protein: Q8C2S7

Amigo3, Amphoterin-induced protein 3, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Amigo3Q8C2S7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 AC153954.1-201ENSMUST00000216959 255 ntBASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Gm19009-201ENSMUST00000223072 823 ntBASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Amigo3Q8C2S7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm28719-201ENSMUST00000187779 1757 ntBASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm13022-201ENSMUST00000121181 285 ntBASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm6485-201ENSMUST00000160676 439 ntBASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm43186-201ENSMUST00000198130 824 ntBASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm5298-201ENSMUST00000201122 892 ntBASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Amigo3Q8C2S7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm42941-201ENSMUST00000200347 1321 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm15352-201ENSMUST00000118696 270 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm15725-201ENSMUST00000119947 1090 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm14219-201ENSMUST00000120414 288 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm5257-201ENSMUST00000121823 790 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm17798-201ENSMUST00000182282 1035 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm8531-201ENSMUST00000188319 893 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm9645-201ENSMUST00000197131 792 ntBASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Amigo3Q8C2S7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Amigo3Q8C2S7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Gm5863-201ENSMUST00000121760 1008 ntBASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Amigo3Q8C2S7 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms