Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm27618-201ENSMUST00000183671 60 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm27631-201ENSMUST00000184163 466 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 AA619741-201ENSMUST00000195095 646 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm45453-201ENSMUST00000211758 853 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Gm17837-201ENSMUST00000186435 985 ntBASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tsen54Q8C2A2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.92□□□□□ -0.66
Tsen54Q8C2A2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms