Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.83□□□□□ -0.2
Trerf1Q8BXJ2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Gm12138-201ENSMUST00000122180 951 ntBASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Gm45384-201ENSMUST00000210451 277 ntBASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trerf1Q8BXJ2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Gm11918-201ENSMUST00000121660 179 ntBASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Gm18307-201ENSMUST00000206864 949 ntBASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Gm5161-201ENSMUST00000075243 853 ntBASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trerf1Q8BXJ2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms