Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sfr1Q8BP27 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.33□□□□□ -0.27
Sfr1Q8BP27 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sfr1Q8BP27 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sfr1Q8BP27 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Sfr1Q8BP27 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm4984-201ENSMUST00000115987 360 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm10156-201ENSMUST00000122364 462 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm17150-201ENSMUST00000165577 381 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm24196-201ENSMUST00000179161 110 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm27847-201ENSMUST00000183711 107 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm27375-201ENSMUST00000183799 107 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.33□□□□□ -0.28
Sfr1Q8BP27 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Gm14350-201ENSMUST00000116642 640 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Gm16202-201ENSMUST00000117532 544 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Proscos-202ENSMUST00000178990 666 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Mir7221-201ENSMUST00000184009 72 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Gm5186-201ENSMUST00000218781 920 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Gm8598-201ENSMUST00000221184 836 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms