Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm12151-201ENSMUST00000121374 290 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm38144-201ENSMUST00000192790 465 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm19931-201ENSMUST00000198920 368 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm19078-201ENSMUST00000206311 727 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Gm9797-201ENSMUST00000052902 613 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp2bQ8BJF9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Gm11524-201ENSMUST00000119349 807 ntBASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2bQ8BJF9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms