Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Gm15429-201ENSMUST00000151268 798 ntBASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn3Q8BHH8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Gm13689-201ENSMUST00000119360 685 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms