Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 AA914427-201ENSMUST00000193194 1166 ntBASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp6nlQ80XC3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Gm2260-201ENSMUST00000184965 657 ntBASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Gm8099-201ENSMUST00000200510 742 ntBASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp6nlQ80XC3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm11930-201ENSMUST00000117788 190 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm13875-201ENSMUST00000120162 282 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm13570-201ENSMUST00000140763 309 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm15276-201ENSMUST00000145953 498 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm38092-201ENSMUST00000195600 653 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms