Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn1Q64347 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn1Q64347 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn1Q64347 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Grk6-205ENSMUST00000224653 2976 ntBASIC16.53■□□□□ 0.24
Clcn1Q64347 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.53■□□□□ 0.24
Clcn1Q64347 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.53■□□□□ 0.24
Clcn1Q64347 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clcn1Q64347 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.53■□□□□ 0.24
Clcn1Q64347 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.53■□□□□ 0.24
Clcn1Q64347 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.53■□□□□ 0.24
Clcn1Q64347 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clcn1Q64347 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clcn1Q64347 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.53■□□□□ 0.24
Clcn1Q64347 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.53■□□□□ 0.24
Clcn1Q64347 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.53■□□□□ 0.24
Clcn1Q64347 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clcn1Q64347 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.53■□□□□ 0.24
Clcn1Q64347 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn1Q64347 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clcn1Q64347 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clcn1Q64347 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn1Q64347 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Clcn1Q64347 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.52■□□□□ 0.24
Clcn1Q64347 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.52■□□□□ 0.24
Clcn1Q64347 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.52■□□□□ 0.24
Clcn1Q64347 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.52■□□□□ 0.24
Clcn1Q64347 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.52■□□□□ 0.24
Clcn1Q64347 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.52■□□□□ 0.24
Clcn1Q64347 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.52■□□□□ 0.24
Clcn1Q64347 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.52■□□□□ 0.24
Clcn1Q64347 Gm5363-201ENSMUST00000211927 938 ntBASIC16.52■□□□□ 0.24
Clcn1Q64347 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.52■□□□□ 0.24
Clcn1Q64347 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn1Q64347 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn1Q64347 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn1Q64347 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn1Q64347 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn1Q64347 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn1Q64347 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn1Q64347 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Clcn1Q64347 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Clcn1Q64347 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.51■□□□□ 0.23
Clcn1Q64347 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.51■□□□□ 0.23
Clcn1Q64347 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.51■□□□□ 0.23
Clcn1Q64347 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.51■□□□□ 0.23
Clcn1Q64347 Gm42660-201ENSMUST00000197733 947 ntBASIC16.51■□□□□ 0.23
Clcn1Q64347 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Clcn1Q64347 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.51■□□□□ 0.23
Clcn1Q64347 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Clcn1Q64347 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn1Q64347 Acot6-202ENSMUST00000222921 3622 ntBASIC16.51■□□□□ 0.23
Clcn1Q64347 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms