Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm8410-201ENSMUST00000117225 605 ntBASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm4995-201ENSMUST00000117247 432 ntBASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm15653-201ENSMUST00000119247 907 ntBASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm12428-201ENSMUST00000119844 727 ntBASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm24513-201ENSMUST00000174964 138 ntBASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Gm2213-201ENSMUST00000197485 688 ntBASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim40Q3UWA4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.23□□□□□ -0.45
Trim40Q3UWA4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Gm11594-201ENSMUST00000122313 162 ntBASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Mir1897-201ENSMUST00000122581 272 ntBASIC12.22□□□□□ -0.45
Trim40Q3UWA4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Gm7774-201ENSMUST00000200064 533 ntBASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.22□□□□□ -0.45
Trim40Q3UWA4 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms