Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.69□□□□□ -0.7
Trim63Q38HM4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.68□□□□□ -0.7
Trim63Q38HM4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.68□□□□□ -0.7
Trim63Q38HM4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.68□□□□□ -0.7
Trim63Q38HM4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Gm25745-201ENSMUST00000174945 133 ntBASIC10.68□□□□□ -0.7
Trim63Q38HM4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Gm8655-201ENSMUST00000221159 852 ntBASIC10.68□□□□□ -0.7
Trim63Q38HM4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.68□□□□□ -0.7
Trim63Q38HM4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim63Q38HM4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.67□□□□□ -0.7
Trim63Q38HM4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.67□□□□□ -0.7
Trim63Q38HM4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms