Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Smn1P97801 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smn1P97801 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smn1P97801 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.18□□□□□ -0.62
Smn1P97801 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Smn1P97801 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.18□□□□□ -0.62
Smn1P97801 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Smn1P97801 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.18□□□□□ -0.62
Smn1P97801 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.18□□□□□ -0.62
Smn1P97801 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.18□□□□□ -0.62
Smn1P97801 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.18□□□□□ -0.62
Smn1P97801 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Smn1P97801 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smn1P97801 Gm27618-201ENSMUST00000183671 60 ntBASIC11.18□□□□□ -0.62
Smn1P97801 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smn1P97801 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.18□□□□□ -0.62
Smn1P97801 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.18□□□□□ -0.62
Smn1P97801 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.18□□□□□ -0.62
Smn1P97801 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.18□□□□□ -0.62
Smn1P97801 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Smn1P97801 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smn1P97801 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Smn1P97801 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Smn1P97801 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smn1P97801 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.17□□□□□ -0.62
Smn1P97801 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.17□□□□□ -0.62
Smn1P97801 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Smn1P97801 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.17□□□□□ -0.62
Smn1P97801 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.17□□□□□ -0.62
Smn1P97801 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Smn1P97801 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.17□□□□□ -0.62
Smn1P97801 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.17□□□□□ -0.62
Smn1P97801 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smn1P97801 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms