Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Gfra1P97785 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.8□□□□□ -0.68
Gfra1P97785 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.8□□□□□ -0.68
Gfra1P97785 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.8□□□□□ -0.68
Gfra1P97785 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.8□□□□□ -0.68
Gfra1P97785 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.8□□□□□ -0.68
Gfra1P97785 Gm18041-201ENSMUST00000218210 618 ntBASIC10.8□□□□□ -0.68
Gfra1P97785 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.8□□□□□ -0.68
Gfra1P97785 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gfra1P97785 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.8□□□□□ -0.68
Gfra1P97785 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.8□□□□□ -0.68
Gfra1P97785 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gfra1P97785 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.79□□□□□ -0.68
Gfra1P97785 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Gfra1P97785 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Gfra1P97785 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.79□□□□□ -0.68
Gfra1P97785 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gfra1P97785 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Gm11637-201ENSMUST00000120601 592 ntBASIC10.79□□□□□ -0.68
Gfra1P97785 Gm13123-201ENSMUST00000122173 492 ntBASIC10.79□□□□□ -0.68
Gfra1P97785 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.79□□□□□ -0.68
Gfra1P97785 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
Gfra1P97785 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Gfra1P97785 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Gm27514-201ENSMUST00000183692 110 ntBASIC10.79□□□□□ -0.68
Gfra1P97785 Gm27682-201ENSMUST00000183930 110 ntBASIC10.79□□□□□ -0.68
Gfra1P97785 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.79□□□□□ -0.68
Gfra1P97785 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Gfra1P97785 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gfra1P97785 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Gfra1P97785 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Gfra1P97785 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gfra1P97785 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Gfra1P97785 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.78□□□□□ -0.68
Gfra1P97785 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.78□□□□□ -0.68
Gfra1P97785 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Gfra1P97785 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.78□□□□□ -0.68
Gfra1P97785 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gfra1P97785 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Gfra1P97785 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gfra1P97785 Gm13392-201ENSMUST00000117708 150 ntBASIC10.78□□□□□ -0.68
Gfra1P97785 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.78□□□□□ -0.68
Gfra1P97785 Mir7221-201ENSMUST00000184009 72 ntBASIC10.78□□□□□ -0.68
Gfra1P97785 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Gfra1P97785 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms