Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.88□□□□□ -0.35
Shox2P70390 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Shox2P70390 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Shox2P70390 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.87□□□□□ -0.35
Shox2P70390 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Shox2P70390 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Shox2P70390 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Gm9103-201ENSMUST00000119371 405 ntBASIC12.87□□□□□ -0.35
Shox2P70390 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.87□□□□□ -0.35
Shox2P70390 Gm14140-201ENSMUST00000119999 995 ntBASIC12.87□□□□□ -0.35
Shox2P70390 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.87□□□□□ -0.35
Shox2P70390 Gm18766-201ENSMUST00000189811 808 ntBASIC12.87□□□□□ -0.35
Shox2P70390 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.87□□□□□ -0.35
Shox2P70390 Gm5425-201ENSMUST00000214125 459 ntBASIC12.87□□□□□ -0.35
Shox2P70390 Gm8227-201ENSMUST00000223306 571 ntBASIC12.87□□□□□ -0.35
Shox2P70390 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.87□□□□□ -0.35
Shox2P70390 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Shox2P70390 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shox2P70390 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.86□□□□□ -0.35
Shox2P70390 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Shox2P70390 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Shox2P70390 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.86□□□□□ -0.35
Shox2P70390 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.86□□□□□ -0.35
Shox2P70390 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.86□□□□□ -0.35
Shox2P70390 Gm29541-201ENSMUST00000191351 678 ntBASIC12.86□□□□□ -0.35
Shox2P70390 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Shox2P70390 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.86□□□□□ -0.35
Shox2P70390 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Shox2P70390 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Shox2P70390 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shox2P70390 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.85□□□□□ -0.35
Shox2P70390 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Shox2P70390 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Gm15240-201ENSMUST00000118156 720 ntBASIC12.85□□□□□ -0.35
Shox2P70390 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shox2P70390 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms