Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.52□□□□□ -0.57
Sec61a1P61620 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Sec61a1P61620 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.52□□□□□ -0.57
Sec61a1P61620 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.52□□□□□ -0.57
Sec61a1P61620 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.52□□□□□ -0.57
Sec61a1P61620 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.52□□□□□ -0.57
Sec61a1P61620 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Sec61a1P61620 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sec61a1P61620 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61a1P61620 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.51□□□□□ -0.57
Sec61a1P61620 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Gm37917-201ENSMUST00000194711 392 ntBASIC11.51□□□□□ -0.57
Sec61a1P61620 Gm9794-201ENSMUST00000202370 423 ntBASIC11.51□□□□□ -0.57
Sec61a1P61620 Gm7653-201ENSMUST00000214567 508 ntBASIC11.51□□□□□ -0.57
Sec61a1P61620 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Sec61a1P61620 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61a1P61620 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Gm4804-201ENSMUST00000182234 999 ntBASIC11.5□□□□□ -0.57
Sec61a1P61620 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.5□□□□□ -0.57
Sec61a1P61620 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Gm28631-201ENSMUST00000190740 334 ntBASIC11.5□□□□□ -0.57
Sec61a1P61620 Gm6745-201ENSMUST00000199216 526 ntBASIC11.5□□□□□ -0.57
Sec61a1P61620 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.5□□□□□ -0.57
Sec61a1P61620 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Gm6180-201ENSMUST00000065243 498 ntBASIC11.5□□□□□ -0.57
Sec61a1P61620 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61a1P61620 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms