Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.49□□□□□ -0.41
Hoxb9P20615 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxb9P20615 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.49□□□□□ -0.41
Hoxb9P20615 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb9P20615 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxb9P20615 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.48□□□□□ -0.41
Hoxb9P20615 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.48□□□□□ -0.41
Hoxb9P20615 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Gm8805-201ENSMUST00000117848 313 ntBASIC12.48□□□□□ -0.41
Hoxb9P20615 Gm12291-201ENSMUST00000121627 311 ntBASIC12.48□□□□□ -0.41
Hoxb9P20615 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.48□□□□□ -0.41
Hoxb9P20615 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxb9P20615 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.48□□□□□ -0.41
Hoxb9P20615 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb9P20615 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxb9P20615 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.47□□□□□ -0.41
Hoxb9P20615 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hoxb9P20615 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxb9P20615 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxb9P20615 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxb9P20615 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb9P20615 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms