Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cntn1P12960 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cntn1P12960 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn1P12960 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn1P12960 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn1P12960 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn1P12960 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn1P12960 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn1P12960 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn1P12960 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn1P12960 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.52□□□□□ -0.41
Cntn1P12960 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Cntn1P12960 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.52□□□□□ -0.41
Cntn1P12960 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Gm26185-201ENSMUST00000157692 266 ntBASIC12.52□□□□□ -0.41
Cntn1P12960 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cntn1P12960 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Cntn1P12960 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Gm37008-201ENSMUST00000195712 319 ntBASIC12.52□□□□□ -0.41
Cntn1P12960 Gm19184-201ENSMUST00000196798 928 ntBASIC12.52□□□□□ -0.41
Cntn1P12960 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.52□□□□□ -0.41
Cntn1P12960 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.52□□□□□ -0.41
Cntn1P12960 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.52□□□□□ -0.41
Cntn1P12960 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.52□□□□□ -0.41
Cntn1P12960 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.52□□□□□ -0.41
Cntn1P12960 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cntn1P12960 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.52□□□□□ -0.41
Cntn1P12960 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn1P12960 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.51□□□□□ -0.41
Cntn1P12960 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Gm22018-201ENSMUST00000104357 131 ntBASIC12.51□□□□□ -0.41
Cntn1P12960 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Cntn1P12960 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.51□□□□□ -0.41
Cntn1P12960 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cntn1P12960 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.51□□□□□ -0.41
Cntn1P12960 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.51□□□□□ -0.41
Cntn1P12960 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.51□□□□□ -0.41
Cntn1P12960 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.51□□□□□ -0.41
Cntn1P12960 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Gm9823-201ENSMUST00000051212 327 ntBASIC12.51□□□□□ -0.41
Cntn1P12960 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cntn1P12960 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cntn1P12960 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cntn1P12960 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cntn1P12960 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn1P12960 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.5□□□□□ -0.41
Cntn1P12960 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cntn1P12960 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Cntn1P12960 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Cntn1P12960 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Cntn1P12960 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.5□□□□□ -0.41
Cntn1P12960 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.5□□□□□ -0.41
Cntn1P12960 Gm25927-201ENSMUST00000175058 117 ntBASIC12.5□□□□□ -0.41
Cntn1P12960 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.5□□□□□ -0.41
Cntn1P12960 Gm18054-201ENSMUST00000207539 555 ntBASIC12.5□□□□□ -0.41
Cntn1P12960 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.5□□□□□ -0.41
Cntn1P12960 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn1P12960 Snora73a-201ENSMUST00000082453 205 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms