Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.83□□□□□ -0.2
TnfP06804 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TnfP06804 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
TnfP06804 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.83□□□□□ -0.2
TnfP06804 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.82□□□□□ -0.2
TnfP06804 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.82□□□□□ -0.2
TnfP06804 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.82□□□□□ -0.2
TnfP06804 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TnfP06804 Gm13342-201ENSMUST00000121055 207 ntBASIC13.82□□□□□ -0.2
TnfP06804 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.82□□□□□ -0.2
TnfP06804 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.82□□□□□ -0.2
TnfP06804 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Gm24548-201ENSMUST00000158650 108 ntBASIC13.82□□□□□ -0.2
TnfP06804 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.82□□□□□ -0.2
TnfP06804 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Mospd4-201ENSMUST00000180618 576 ntBASIC13.82□□□□□ -0.2
TnfP06804 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.82□□□□□ -0.2
TnfP06804 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.82□□□□□ -0.2
TnfP06804 Gm6334-201ENSMUST00000207083 228 ntBASIC13.82□□□□□ -0.2
TnfP06804 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.82□□□□□ -0.2
TnfP06804 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.82□□□□□ -0.2
TnfP06804 Gm8227-201ENSMUST00000223306 571 ntBASIC13.82□□□□□ -0.2
TnfP06804 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.82□□□□□ -0.2
TnfP06804 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.82□□□□□ -0.2
TnfP06804 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.82□□□□□ -0.2
TnfP06804 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TnfP06804 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.82□□□□□ -0.2
TnfP06804 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TnfP06804 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TnfP06804 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TnfP06804 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.82□□□□□ -0.2
TnfP06804 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TnfP06804 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.81□□□□□ -0.2
TnfP06804 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.81□□□□□ -0.2
TnfP06804 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.81□□□□□ -0.2
TnfP06804 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.81□□□□□ -0.2
TnfP06804 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.81□□□□□ -0.2
TnfP06804 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.81□□□□□ -0.2
TnfP06804 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.81□□□□□ -0.2
TnfP06804 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.81□□□□□ -0.2
TnfP06804 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.81□□□□□ -0.2
TnfP06804 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Gm8099-201ENSMUST00000200510 742 ntBASIC13.81□□□□□ -0.2
TnfP06804 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.81□□□□□ -0.2
TnfP06804 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.81□□□□□ -0.2
TnfP06804 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TnfP06804 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TnfP06804 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TnfP06804 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TnfP06804 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TnfP06804 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms